Lesson 2. High-throughput DNA sequencing. |
Sequencing platforms. Sequencing libraries. Sequencing coverage. FASTQ format. Read quality control. |
Lesson 4. Variant calling |
Types of variants. Identification. Calling strategies. VCF format. Structural variation. Filtering. Annotation
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Lesson 6. Genome assembly and annotation |
Assembly. Algorithms. Evaluation. K-mer analysis. Genome annotation. |