Lesson 2. High-throughput DNA sequencing. |
Sequencing platforms. Sequencing libraries. Sequencing coverage. FASTQ format. Read quality control. |
Lesson 4. Variant calling |
Types of variants. Identification. VCF format. Variant filtering. Annotation. Somatic variants. |
Lesson 6. Metagenomic analysis |
Microbiome. Metagenomics. 16S analysis. Shotgun analysis. Alpha and beta diversity. Metagenomic annotation. |